Hardware in loop simulation in MATLAB and Code Composer Studio

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Hardware in loop simulation in MATLAB and Code Composer Studio
I need to simulate two mass spring damper systems in MATLAB, both of which will receive their Forcing inputs through UART of micro-controller. The positional output of these mass spring damper systems have to be continuously compared to a reference point array of a layer of a cube with a circular hole. If the output position matches the reference position in the array, a signal is sent through UART to micro-controller to blink led.
I can manage micro-controller side coding, but need help with MATLAB coding.
Skills:
Matlab and Mathematica
, Electrical Engineering
, Engineering

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